Tutorial dataset

This is a synthetic dataset to get you familiar with the GENOTYPE:PHENOTYPE query system

CASE 1)  There are ~80% infividuals with height_cm>120 and carrying a variant either as 0/1 or 1/1; only ~10% individuals with height_cm<=120 carry a variant.

- chr1:10000
- chr2:10137

CASE 2) There are ~70% infividuals with [height_cm<100 AND resistenza="yes"]   carrying a variant either as 0/1 or 1/1 (a minimum of 70% NOT 0/0 among phenotype positive samples); only ~10% individuals without [height_cm<100 AND resistenza="yes"] have variants (i.e. minimum of 90% of negative phenotype samples with 0/0).

- chr3:20000
- chr4:20191

CASE 3) >85% (6/7) individuals with flowering_time>85 carry a recessive mutation (1/1) while all other infividuals (flowering_time<=85) carry either 0/0 or 0/1

- chr5:30000
- chr6:30223

CASE 4) All individuals with weight_g>=30 have 0/1 variant while all other (weight_g<30) have 0/0
- chr7:40000
- chr8:40257